Serveur d'exploration sur les relations entre la France et l'Australie

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Cell morphology drives spatial patterning in microbial communities

Identifieur interne : 002256 ( Main/Exploration ); précédent : 002255; suivant : 002257

Cell morphology drives spatial patterning in microbial communities

Auteurs : William P. J. Smith [Royaume-Uni] ; Yohan Davit [France] ; James M. Osborne [Australie] ; Wook Kim [Royaume-Uni] ; Kevin R. Foster [Royaume-Uni] ; Joe M. Pitt-Francis [Royaume-Uni]

Source :

RBID : PMC:5255625

Abstract

Significance

Microbial communities contain cells of different shapes, and yet we know little about how these shapes affect community biology. We have developed a computational model to study the effects of microbial shape in communities. Our model predicts that shape will have strong effects on cells’ positioning, and, consequently, their survival and reproduction. Rod-shaped cells are better at colonizing the base of the community and its expanding edges, whereas round cells dominate the upper surface. We show that the same patterns occur in colonies of Escherichia coli, using strains with different shapes. Our work suggests that cell shape is a major determinant of patterning and evolutionary fitness within microbial communities.


Url:
DOI: 10.1073/pnas.1613007114
PubMed: 28039436
PubMed Central: 5255625


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Cell morphology drives spatial patterning in microbial communities</title>
<author>
<name sortKey="Smith, William P J" sort="Smith, William P J" uniqKey="Smith W" first="William P. J." last="Smith">William P. J. Smith</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Computer Science,
<institution>University of Oxford</institution>
, Oxford OX1 3QD,
<country>United Kingdom</country>
;</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Davit, Yohan" sort="Davit, Yohan" uniqKey="Davit Y" first="Yohan" last="Davit">Yohan Davit</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">
<institution>Institut de Mécanique des Fluides de Toulouse (IMFT)</institution>
, Université de Toulouse, Centre National de la Recherche Scientifique (CNRS), Institut National Polytechnique de Toulouse (INPT), Université Paul Sabatier (UPS), F-31400 Toulouse,
<country>France</country>
;</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Osborne, James M" sort="Osborne, James M" uniqKey="Osborne J" first="James M." last="Osborne">James M. Osborne</name>
<affiliation wicri:level="1">
<nlm:aff id="aff3">School of Mathematics and Statistics,
<institution>University of Melbourne</institution>
, VIC 3010,
<country>Australia</country>
;</nlm:aff>
<country xml:lang="fr">Australie</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Kim, Wook" sort="Kim, Wook" uniqKey="Kim W" first="Wook" last="Kim">Wook Kim</name>
<affiliation wicri:level="1">
<nlm:aff id="aff4">Department of Zoology,
<institution>University of Oxford</institution>
, Oxford OX1 3PS,
<country>United Kingdom</country>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Foster, Kevin R" sort="Foster, Kevin R" uniqKey="Foster K" first="Kevin R." last="Foster">Kevin R. Foster</name>
<affiliation wicri:level="1">
<nlm:aff id="aff4">Department of Zoology,
<institution>University of Oxford</institution>
, Oxford OX1 3PS,
<country>United Kingdom</country>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Pitt Francis, Joe M" sort="Pitt Francis, Joe M" uniqKey="Pitt Francis J" first="Joe M." last="Pitt-Francis">Joe M. Pitt-Francis</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Computer Science,
<institution>University of Oxford</institution>
, Oxford OX1 3QD,
<country>United Kingdom</country>
;</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">28039436</idno>
<idno type="pmc">5255625</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5255625</idno>
<idno type="RBID">PMC:5255625</idno>
<idno type="doi">10.1073/pnas.1613007114</idno>
<date when="2016">2016</date>
<idno type="wicri:Area/Pmc/Corpus">001C12</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001C12</idno>
<idno type="wicri:Area/Pmc/Curation">001A70</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001A70</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000A86</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000A86</idno>
<idno type="wicri:source">PubMed</idno>
<idno type="wicri:Area/PubMed/Corpus">001335</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001335</idno>
<idno type="wicri:Area/PubMed/Curation">001313</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001313</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001313</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001313</idno>
<idno type="wicri:Area/Ncbi/Merge">004106</idno>
<idno type="wicri:Area/Ncbi/Curation">004106</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">004106</idno>
<idno type="wicri:doubleKey">0027-8424:2016:Smith W:cell:morphology:drives</idno>
<idno type="wicri:Area/Main/Merge">002255</idno>
<idno type="wicri:Area/Main/Curation">002256</idno>
<idno type="wicri:Area/Main/Exploration">002256</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Cell morphology drives spatial patterning in microbial communities</title>
<author>
<name sortKey="Smith, William P J" sort="Smith, William P J" uniqKey="Smith W" first="William P. J." last="Smith">William P. J. Smith</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Computer Science,
<institution>University of Oxford</institution>
, Oxford OX1 3QD,
<country>United Kingdom</country>
;</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Davit, Yohan" sort="Davit, Yohan" uniqKey="Davit Y" first="Yohan" last="Davit">Yohan Davit</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">
<institution>Institut de Mécanique des Fluides de Toulouse (IMFT)</institution>
, Université de Toulouse, Centre National de la Recherche Scientifique (CNRS), Institut National Polytechnique de Toulouse (INPT), Université Paul Sabatier (UPS), F-31400 Toulouse,
<country>France</country>
;</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Osborne, James M" sort="Osborne, James M" uniqKey="Osborne J" first="James M." last="Osborne">James M. Osborne</name>
<affiliation wicri:level="1">
<nlm:aff id="aff3">School of Mathematics and Statistics,
<institution>University of Melbourne</institution>
, VIC 3010,
<country>Australia</country>
;</nlm:aff>
<country xml:lang="fr">Australie</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Kim, Wook" sort="Kim, Wook" uniqKey="Kim W" first="Wook" last="Kim">Wook Kim</name>
<affiliation wicri:level="1">
<nlm:aff id="aff4">Department of Zoology,
<institution>University of Oxford</institution>
, Oxford OX1 3PS,
<country>United Kingdom</country>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Foster, Kevin R" sort="Foster, Kevin R" uniqKey="Foster K" first="Kevin R." last="Foster">Kevin R. Foster</name>
<affiliation wicri:level="1">
<nlm:aff id="aff4">Department of Zoology,
<institution>University of Oxford</institution>
, Oxford OX1 3PS,
<country>United Kingdom</country>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Pitt Francis, Joe M" sort="Pitt Francis, Joe M" uniqKey="Pitt Francis J" first="Joe M." last="Pitt-Francis">Joe M. Pitt-Francis</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Computer Science,
<institution>University of Oxford</institution>
, Oxford OX1 3QD,
<country>United Kingdom</country>
;</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Proceedings of the National Academy of Sciences of the United States of America</title>
<idno type="ISSN">0027-8424</idno>
<idno type="eISSN">1091-6490</idno>
<imprint>
<date when="2016">2016</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<title>Significance</title>
<p>Microbial communities contain cells of different shapes, and yet we know little about how these shapes affect community biology. We have developed a computational model to study the effects of microbial shape in communities. Our model predicts that shape will have strong effects on cells’ positioning, and, consequently, their survival and reproduction. Rod-shaped cells are better at colonizing the base of the community and its expanding edges, whereas round cells dominate the upper surface. We show that the same patterns occur in colonies of
<italic>Escherichia coli</italic>
, using strains with different shapes. Our work suggests that cell shape is a major determinant of patterning and evolutionary fitness within microbial communities.</p>
</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Australie</li>
<li>France</li>
<li>Royaume-Uni</li>
</country>
</list>
<tree>
<country name="Royaume-Uni">
<noRegion>
<name sortKey="Smith, William P J" sort="Smith, William P J" uniqKey="Smith W" first="William P. J." last="Smith">William P. J. Smith</name>
</noRegion>
<name sortKey="Foster, Kevin R" sort="Foster, Kevin R" uniqKey="Foster K" first="Kevin R." last="Foster">Kevin R. Foster</name>
<name sortKey="Kim, Wook" sort="Kim, Wook" uniqKey="Kim W" first="Wook" last="Kim">Wook Kim</name>
<name sortKey="Pitt Francis, Joe M" sort="Pitt Francis, Joe M" uniqKey="Pitt Francis J" first="Joe M." last="Pitt-Francis">Joe M. Pitt-Francis</name>
</country>
<country name="France">
<noRegion>
<name sortKey="Davit, Yohan" sort="Davit, Yohan" uniqKey="Davit Y" first="Yohan" last="Davit">Yohan Davit</name>
</noRegion>
</country>
<country name="Australie">
<noRegion>
<name sortKey="Osborne, James M" sort="Osborne, James M" uniqKey="Osborne J" first="James M." last="Osborne">James M. Osborne</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Asie/explor/AustralieFrV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002256 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 002256 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Asie
   |area=    AustralieFrV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     PMC:5255625
   |texte=   Cell morphology drives spatial patterning in microbial communities
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:28039436" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a AustralieFrV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Dec 5 10:43:12 2017. Site generation: Tue Mar 5 14:07:20 2024